# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

PortSystem          1.0

name                hmmer
version             3.4
revision            0

categories          science
maintainers         {reneeotten @reneeotten} openmaintainer
license             BSD

description         HMMER is used for searching sequence databases for sequence \
                    homologs, and for making sequence alignments
long_description    ${description}. It implements methods using probabilistic \
                    models called profile hidden Markov models (profile HMMs).

homepage            http://hmmer.org/
master_sites        http://eddylab.org/software/hmmer/

checksums           rmd160  ad9708def031ce05e004ffbf5d6d03cd5beb08ae \
                    sha256  ca70d94fd0cf271bd7063423aabb116d42de533117343a9b27a65c17ff06fbf3 \
                    size    19669667

# esl_vmx.h: In function ‘esl_vmx_set_s16’:
# esl_vmx.h: error: incompatible types in assignment
compiler.blacklist-append \
                    *gcc-4.0 *gcc-4.2

test.run            yes
test.target         check

livecheck.type      regex
livecheck.url       ${homepage}/download.html
livecheck.regex     The <strong>current version</strong> is HMMER <strong>(\[0-9.brc\]+)</strong>