# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

PortSystem          1.0
PortGroup           perl5 1.0
PortGroup           deprecated 1.0

# mark deprecated due to lack of upstream support
deprecated.upstream_support no

perl5.branches      5.28 5.30 5.32 5.34
perl5.setup         iPE 0.3.1
revision            2
distname            ipe-${perl5.moduleversion}
categories          perl biology
license             BSD
maintainers         cse.wustl.edu:rpz

# homepage on wustl.edu last seen 20240407
# use archived copy for now, fetch from macports_distfiles
homepage            https://web.archive.org/web/20240407185651/http://mblab.wustl.edu/software.html
master_sites        macports_distfiles

description         Perl module for parameter estimation for Hidden Markov Models.
long_description    iParameterEstimation is a highly configurable maximum likelihood \
                    parameter estimation package for generalized Hidden Markov Models. \
                    Specific configuration files are included for training Twinscan, \
                    N-SCAN and their EST variants. \
                    For information and documentation, see ${homepage}.

checksums           rmd160  57df46c0d1e25c242500bbcb070aa02aaed0f714 \
                    sha256  9849fbbd64d51b72d22a40dff292079949ac7f5d519cf88248b2c58f047c4448 \
                    size    22657646

if {${perl5.major} != ""} {
    depends_lib-append \
                    port:p${perl5.major}-eval \
                    port:p${perl5.major}-xml-checker \
                    port:p${perl5.major}-xml-libxml

    patchfiles      fix-implicit-function-declaration.patch
}

livecheck.type      none