# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4

PortSystem          1.0
PortGroup           R 1.0

R.setup             cran privefl bigsnpr 1.12.18
revision            0
categories-append   math
maintainers         nomaintainer
license             GPL-3
description         Analysis of massive SNP arrays
long_description    {*}${description}
homepage            https://privefl.github.io/bigsnpr
checksums           rmd160  c32275ea9ac87eb1e070a8956b0af729a0a0d5e6 \
                    sha256  492c2296cb09e9363dedf66fa33c007ab014dcd04d16732a6c5f5e334f0f8e4a \
                    size    1065235

depends_lib-append  port:R-bigassertr \
                    port:R-bigparallelr \
                    port:R-bigreadr \
                    port:R-bigsparser \
                    port:R-bigstatsr \
                    port:R-bigutilsr \
                    port:R-data.table \
                    port:R-doRNG \
                    port:R-foreach \
                    port:R-ggplot2 \
                    port:R-magrittr \
                    port:R-Rcpp \
                    port:R-RcppArmadillo \
                    port:R-rmio \
                    port:R-roptim \
                    port:R-runonce \
                    port:R-vctrs

compilers.setup     require_fortran

depends_test-append port:R-bindata \
                    port:R-covr \
                    port:R-dbplyr \
                    port:R-dplyr \
                    port:R-gaston \
                    port:R-glue \
                    port:R-Hmisc \
                    port:R-microbenchmark \
                    port:R-pcadapt \
                    port:R-quadprog \
                    port:R-R.utils \
                    port:R-RhpcBLASctl \
                    port:R-rmutil \
                    port:R-RSpectra \
                    port:R-RSQLite \
                    port:R-spelling \
                    port:R-testthat \
                    port:R-tibble \
                    port:R-xgboost

# FIXME: https://github.com/privefl/bigsnpr/issues/515
test.run            yes