#include <sagetsvhandler.h>

Public Attributes
int	rank = 0
int	label = 0
double	expmass = 0.0
double	calcmass = 0.0
int	charge = 0
std::size_t	peptide_len
int	missed_cleavages
int	semi_enzymatic
double	isotope_error
double	precursor_ppm
double	fragment_ppm
double	hyperscore
double	delta_next
double	delta_best
double	rt
double	aligned_rt
double	predicted_rt
double	delta_rt_model
double	ion_mobility
double	predicted_mobility
double	delta_mobility
std::size_t	matched_peaks
std::size_t	longest_b
std::size_t	longest_y
double	longest_y_pct
double	matched_intensity_pct
std::size_t	scored_candidates
double	poisson
double	sage_discriminant_score
double	posterior_error
double	spectrum_q
double	peptide_q
double	protein_q
double	ms2_intensity

Detailed Description

Definition at line 99 of file sagetsvhandler.h.

Member Data Documentation

◆ aligned_rt

double pappso::cbor::psm::SageTsvHandler::Line::aligned_rt

Definition at line 116 of file sagetsvhandler.h.

◆ calcmass

double pappso::cbor::psm::SageTsvHandler::Line::calcmass = 0.0

Definition at line 104 of file sagetsvhandler.h.

◆ charge

int pappso::cbor::psm::SageTsvHandler::Line::charge = 0

Definition at line 105 of file sagetsvhandler.h.

◆ delta_best

double pappso::cbor::psm::SageTsvHandler::Line::delta_best

Definition at line 114 of file sagetsvhandler.h.

◆ delta_mobility

double pappso::cbor::psm::SageTsvHandler::Line::delta_mobility

Definition at line 121 of file sagetsvhandler.h.

◆ delta_next

double pappso::cbor::psm::SageTsvHandler::Line::delta_next

Definition at line 113 of file sagetsvhandler.h.

◆ delta_rt_model

double pappso::cbor::psm::SageTsvHandler::Line::delta_rt_model

Definition at line 118 of file sagetsvhandler.h.

◆ expmass

double pappso::cbor::psm::SageTsvHandler::Line::expmass = 0.0

Definition at line 103 of file sagetsvhandler.h.

◆ fragment_ppm

double pappso::cbor::psm::SageTsvHandler::Line::fragment_ppm

Definition at line 111 of file sagetsvhandler.h.

◆ hyperscore

double pappso::cbor::psm::SageTsvHandler::Line::hyperscore

Definition at line 112 of file sagetsvhandler.h.

◆ ion_mobility

double pappso::cbor::psm::SageTsvHandler::Line::ion_mobility

Definition at line 119 of file sagetsvhandler.h.

◆ isotope_error

double pappso::cbor::psm::SageTsvHandler::Line::isotope_error

Definition at line 109 of file sagetsvhandler.h.

◆ label

int pappso::cbor::psm::SageTsvHandler::Line::label = 0

Definition at line 102 of file sagetsvhandler.h.

◆ longest_b

std::size_t pappso::cbor::psm::SageTsvHandler::Line::longest_b

Definition at line 123 of file sagetsvhandler.h.

◆ longest_y

std::size_t pappso::cbor::psm::SageTsvHandler::Line::longest_y

Definition at line 124 of file sagetsvhandler.h.

◆ longest_y_pct

double pappso::cbor::psm::SageTsvHandler::Line::longest_y_pct

Definition at line 125 of file sagetsvhandler.h.

◆ matched_intensity_pct

double pappso::cbor::psm::SageTsvHandler::Line::matched_intensity_pct

Definition at line 126 of file sagetsvhandler.h.

◆ matched_peaks

std::size_t pappso::cbor::psm::SageTsvHandler::Line::matched_peaks

Definition at line 122 of file sagetsvhandler.h.

◆ missed_cleavages

int pappso::cbor::psm::SageTsvHandler::Line::missed_cleavages

Definition at line 107 of file sagetsvhandler.h.

◆ ms2_intensity

double pappso::cbor::psm::SageTsvHandler::Line::ms2_intensity

Definition at line 134 of file sagetsvhandler.h.

◆ peptide_len

std::size_t pappso::cbor::psm::SageTsvHandler::Line::peptide_len

Definition at line 106 of file sagetsvhandler.h.

◆ peptide_q

double pappso::cbor::psm::SageTsvHandler::Line::peptide_q

Definition at line 132 of file sagetsvhandler.h.

◆ poisson

double pappso::cbor::psm::SageTsvHandler::Line::poisson

Definition at line 128 of file sagetsvhandler.h.

◆ posterior_error

double pappso::cbor::psm::SageTsvHandler::Line::posterior_error

Definition at line 130 of file sagetsvhandler.h.

◆ precursor_ppm

double pappso::cbor::psm::SageTsvHandler::Line::precursor_ppm

Definition at line 110 of file sagetsvhandler.h.

◆ predicted_mobility

double pappso::cbor::psm::SageTsvHandler::Line::predicted_mobility

Definition at line 120 of file sagetsvhandler.h.

◆ predicted_rt

double pappso::cbor::psm::SageTsvHandler::Line::predicted_rt

Definition at line 117 of file sagetsvhandler.h.

◆ protein_q

double pappso::cbor::psm::SageTsvHandler::Line::protein_q

Definition at line 133 of file sagetsvhandler.h.

◆ rank

int pappso::cbor::psm::SageTsvHandler::Line::rank = 0

Definition at line 101 of file sagetsvhandler.h.

◆ rt

double pappso::cbor::psm::SageTsvHandler::Line::rt

Definition at line 115 of file sagetsvhandler.h.

◆ sage_discriminant_score

double pappso::cbor::psm::SageTsvHandler::Line::sage_discriminant_score

Definition at line 129 of file sagetsvhandler.h.

◆ scored_candidates

std::size_t pappso::cbor::psm::SageTsvHandler::Line::scored_candidates

Definition at line 127 of file sagetsvhandler.h.

◆ semi_enzymatic

int pappso::cbor::psm::SageTsvHandler::Line::semi_enzymatic

Definition at line 108 of file sagetsvhandler.h.

◆ spectrum_q

double pappso::cbor::psm::SageTsvHandler::Line::spectrum_q

Definition at line 131 of file sagetsvhandler.h.

The documentation for this struct was generated from the following file:

pappsomspp/core/processing/cbor/psm/sage/sagetsvhandler.h

Public Attributes