Structure with statistical information about memory allocation footprint, serialization projection, number of vectors. More...
#include <bmfunc.h>
Public Member Functions | |
| bv_statistics () BMNOEXCEPT | |
| void | add_bit_block () BMNOEXCEPT |
| cound bit block | |
| void | add_gap_block (unsigned capacity, unsigned length, unsigned level) BMNOEXCEPT |
| count gap block | |
| void | reset () BMNOEXCEPT |
| Reset statisctics. | |
| void | add (const bv_statistics &st) BMNOEXCEPT |
| Sum data from another sttructure. | |
Data Fields | |
| size_t | bit_blocks |
| Number of bit blocks. | |
| size_t | gap_blocks |
| Number of GAP blocks. | |
| size_t | ptr_sub_blocks |
| Number of sub-blocks. | |
| size_t | bv_count |
| Number of bit-vectors. | |
| size_t | max_serialize_mem |
| estimated maximum memory for serialization | |
| size_t | memory_used |
| memory usage for all blocks and service tables | |
| size_t | gap_cap_overhead |
| gap memory overhead between length and capacity | |
| gap_word_t | gap_levels [bm::gap_levels] |
| GAP block lengths in the bvect. | |
| unsigned long long | gaps_by_level [bm::gap_levels] |
| number of GAP blocks at each level | |
Detailed Description
Structure with statistical information about memory allocation footprint, serialization projection, number of vectors.
Constructor & Destructor Documentation
◆ bv_statistics()
|
inline |
Member Function Documentation
◆ add()
|
inline |
Sum data from another sttructure.
Definition at line 103 of file bmfunc.h.
References bit_blocks, BMNOEXCEPT, bv_count, bv_statistics(), gap_blocks, gap_cap_overhead, max_serialize_mem, memory_used, and ptr_sub_blocks.
Referenced by bm::basic_bmatrix< BV >::calc_stat(), bm::base_sparse_vector< Val, BV, MAX_SIZE >::optimize(), bm::basic_bmatrix< BV >::optimize(), bm::sparse_vector< Val, BV >::optimize(), and bm::str_sparse_vector< CharType, BV, STR_SIZE >::optimize().
◆ add_bit_block()
|
inline |
cound bit block
Definition at line 70 of file bmfunc.h.
References bit_blocks, BMNOEXCEPT, max_serialize_mem, memory_used, and bm::set_block_size.
◆ add_gap_block()
|
inline |
count gap block
Definition at line 79 of file bmfunc.h.
References BM_ASSERT, BMNOEXCEPT, gap_blocks, gap_cap_overhead, bm::gap_levels, gaps_by_level, max_serialize_mem, and memory_used.
◆ reset()
|
inline |
Reset statisctics.
Definition at line 94 of file bmfunc.h.
References bit_blocks, BMNOEXCEPT, bv_count, gap_blocks, gap_cap_overhead, bm::gap_levels, gaps_by_level, max_serialize_mem, memory_used, and ptr_sub_blocks.
Referenced by bm::optimize_plan_builder< SVect, Lock >::build_plan(), bv_statistics(), bm::basic_bmatrix< BV >::optimize(), bm::bvector< Alloc >::optimize(), and bm::sparse_vector< Val, BV >::optimize().
Field Documentation
◆ bit_blocks
| size_t bm::bv_statistics::bit_blocks |
Number of bit blocks.
- Examples
- sample11.cpp, sample26.cpp, sample3.cpp, and sample4.cpp.
Definition at line 57 of file bmfunc.h.
Referenced by add(), add_bit_block(), bm::str_sparse_vector< CharType, BV, STR_SIZE >::calc_stat(), generate_bvector(), print_statistics(), print_statistics(), print_statistics(), reset(), and serialize_bvector().
◆ bv_count
| size_t bm::bv_statistics::bv_count |
Number of bit-vectors.
Definition at line 60 of file bmfunc.h.
Referenced by add(), bm::str_sparse_vector< CharType, BV, STR_SIZE >::calc_stat(), and reset().
◆ gap_blocks
| size_t bm::bv_statistics::gap_blocks |
Number of GAP blocks.
- Examples
- sample11.cpp, sample26.cpp, sample3.cpp, and sample4.cpp.
Definition at line 58 of file bmfunc.h.
Referenced by add(), add_gap_block(), bm::str_sparse_vector< CharType, BV, STR_SIZE >::calc_stat(), generate_bvector(), print_statistics(), print_statistics(), print_statistics(), reset(), and serialize_bvector().
◆ gap_cap_overhead
| size_t bm::bv_statistics::gap_cap_overhead |
gap memory overhead between length and capacity
- Examples
- sample26.cpp.
Definition at line 63 of file bmfunc.h.
Referenced by add(), add_gap_block(), bm::str_sparse_vector< CharType, BV, STR_SIZE >::calc_stat(), print_statistics(), and reset().
◆ gap_levels
| gap_word_t bm::bv_statistics::gap_levels[bm::gap_levels] |
GAP block lengths in the bvect.
Definition at line 64 of file bmfunc.h.
Referenced by bm::bvector< Alloc >::optimize().
◆ gaps_by_level
| unsigned long long bm::bv_statistics::gaps_by_level[bm::gap_levels] |
number of GAP blocks at each level
Definition at line 65 of file bmfunc.h.
Referenced by add_gap_block(), and reset().
◆ max_serialize_mem
| size_t bm::bv_statistics::max_serialize_mem |
estimated maximum memory for serialization
- Examples
- sample26.cpp, sample3.cpp, sample4.cpp, xsample01.cpp, and xsample07a.cpp.
Definition at line 61 of file bmfunc.h.
Referenced by add(), add_bit_block(), add_gap_block(), bm::str_sparse_vector< CharType, BV, STR_SIZE >::calc_stat(), convert_bv2bvs(), generate_k_mers(), bm::bvector< Alloc >::optimize(), print_statistics(), print_statistics(), print_statistics(), reset(), bm::serializer< BV >::serialize(), and serialize_bvector().
◆ memory_used
| size_t bm::bv_statistics::memory_used |
memory usage for all blocks and service tables
- Examples
- sample26.cpp, sample3.cpp, sample4.cpp, and xsample01.cpp.
Definition at line 62 of file bmfunc.h.
Referenced by add(), add_bit_block(), add_gap_block(), calc_memory_footprint(), bm::str_sparse_vector< CharType, BV, STR_SIZE >::calc_stat(), bm::bvector< Alloc >::optimize(), bm::rsc_sparse_vector< Val, SV >::optimize(), print_statistics(), print_statistics(), print_statistics(), reset(), and serialize_bvector().
◆ ptr_sub_blocks
| size_t bm::bv_statistics::ptr_sub_blocks |
Number of sub-blocks.
Definition at line 59 of file bmfunc.h.
Referenced by add(), bm::str_sparse_vector< CharType, BV, STR_SIZE >::calc_stat(), and reset().
The documentation for this struct was generated from the following file:
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