Here is a list of all struct and union fields with links to the structures/unions they belong to:
- a -
- add() : bm::aggregator< BV >, bm::aggregator< BV >::arg_groups, bm::aggregator< BV >::pipeline< Opt >, bm::bv_ref_vector< BV >, bm::bv_statistics, bm::rsc_sparse_vector< Val, SV >::back_insert_iterator, bm::sparse_vector< Val, BV >::back_insert_iterator, bm::sparse_vector_scanner< SV, S_FACTOR >::pipeline< Opt >, bm::str_sparse_vector< CharType, BV, STR_SIZE >::back_insert_iterator, bm::task_batch< BVAlloc >, CKMerAcc
- add_agg_char() : bm::sparse_vector_scanner< SV, S_FACTOR >
- add_bit_block() : bm::bv_statistics
- add_bits() : bit_visitor_functor, bm::bit_visitor_back_inserter_adaptor< BII, size_type >, bm::bit_visitor_callback_adaptor< VCBT, size_type >, bm::bit_vistor_copy_functor< BV >
- add_gap_block() : bm::bv_statistics
- add_group() : CSeqClusters
- add_layout() : data_model
- add_member() : CSeqGroup
- add_member_sync() : CSeqGroup
- add_model() : bm::serializer< BV >
- add_null() : bm::rsc_sparse_vector< Val, SV >::back_insert_iterator, bm::sparse_vector< Val, BV >::back_insert_iterator, bm::str_sparse_vector< CharType, BV, STR_SIZE >::back_insert_iterator
- add_range() : bit_visitor_functor, bm::bit_visitor_back_inserter_adaptor< BII, size_type >, bm::bit_visitor_callback_adaptor< VCBT, size_type >, bm::bit_vistor_copy_functor< BV >
- add_remap_stat() : bm::str_sparse_vector< CharType, BV, STR_SIZE >::back_insert_iterator
- add_repeats() : bm::chrono_taker< TOut >
- add_sequence() : CSequenceColl
- add_sparse_vector() : bm::bv_ref_vector< BV >
- add_strand() : data_model
- add_value() : bm::str_sparse_vector< CharType, BV, STR_SIZE >::back_insert_iterator
- add_value_no_null() : bm::sparse_vector< Val, BV >::back_insert_iterator
- add_vectors() : bm::bv_ref_vector< BV >
- addr_res_ : bm::compressed_collection< Value, BV >
- address_resolver_type : bm::compressed_collection< Value, BV >, bm::compressed_collection_deserializer< CBC >, bm::compressed_collection_serializer< CBC >
- address_type : bm::compressed_collection< Value, BV >
- advance() : bm::bvector< Alloc >::enumerator, bm::interval_enumerator< BV >, bm::rsc_sparse_vector< Val, SV >::const_iterator, bm::sparse_vector< Val, BV >::const_iterator, bm::str_sparse_vector< CharType, BV, STR_SIZE >::const_iterator
- agg_pipe_ : bm::sparse_vector_scanner< SV, S_FACTOR >::pipeline< Opt >
- aggregate_AND_OR_slices() : bm::sparse_vector_scanner< SV, S_FACTOR >
- aggregate_OR_slices() : bm::sparse_vector_scanner< SV, S_FACTOR >
- aggregator() : bm::aggregator< BV >, bm::aggregator< BV >::pipeline< Opt >, bm::bvector< Alloc >
- aggregator_pipeline_type : bm::sparse_vector_scanner< SV, S_FACTOR >::pipeline< Opt >
- aggregator_type : bm::sparse_vector_scanner< SV, S_FACTOR >
- all_set_block() : bm::all_set< T >::all_set_block
- alloc_ : bm::basic_bmatrix< BV >, bm::deserializer< BV, DEC >, bm::sparse_vector_deserializer< SV >
- alloc_bit_block() : bm::alloc_pool< BA, PA >, bm::mem_alloc< BA, PA, APool >
- alloc_gap_block() : bm::mem_alloc< BA, PA, APool >
- alloc_pool() : bm::alloc_pool< BA, PA >
- alloc_pool_p_ : bm::mem_alloc< BA, PA, APool >
- alloc_ptr() : bm::mem_alloc< BA, PA, APool >
- alloc_type : bm::sparse_vector_deserializer< SV >, bm::sparse_vector_serializer< SV >
- allocate() : bm::block_allocator, bm::ptr_allocator, dbg_block_allocator, dbg_ptr_allocator
- allocate_rows() : bm::basic_bmatrix< BV >
- allocation_policy() : bm::bvector< Alloc >::allocation_policy
- allocation_policy_type : bm::base_sparse_vector< Val, BV, MAX_SIZE >, bm::basic_bmatrix< BV >, bm::rsc_sparse_vector< Val, SV >, bm::sparse_vector< Val, BV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >
- allocator_pool_type : bm::aggregator< BV >, bm::base_sparse_vector< Val, BV, MAX_SIZE >, bm::basic_bmatrix< BV >, bm::bvector< Alloc >, bm::deserializer< BV, DEC >, bm::mem_alloc< BA, PA, APool >, bm::rsc_sparse_vector< Val, SV >::const_iterator, bm::set2set_11_transform< SV >, bm::sparse_vector< Val, BV >, bm::sparse_vector< Val, BV >::back_insert_iterator, bm::sparse_vector< Val, BV >::const_iterator, bm::sparse_vector_deserializer< SV >, bm::sparse_vector_scanner< SV, S_FACTOR >, bm::sparse_vector_serializer< SV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >, bm::str_sparse_vector< CharType, BV, STR_SIZE >::back_insert_iterator, bm::str_sparse_vector< CharType, BV, STR_SIZE >::const_iterator
- allocator_type : bm::aggregator< BV >, bm::base_sparse_vector< Val, BV, MAX_SIZE >, bm::basic_bmatrix< BV >, bm::bvector< Alloc >, bm::compressed_collection_deserializer< CBC >, bm::compute_sim_matrix_plan_builder< BV >, bm::deserializer< BV, DEC >, bm::interval_enumerator< BV >, bm::operation_deserializer< BV >, bm::optimize_plan_builder< SVect, Lock >, bm::rsc_sparse_vector< Val, SV >, bm::rsc_sparse_vector< Val, SV >::const_iterator, bm::serializer< BV >, bm::sparse_vector< Val, BV >, bm::sparse_vector< Val, BV >::back_insert_iterator, bm::sparse_vector< Val, BV >::const_iterator, bm::sparse_vector_scanner< SV, S_FACTOR >, bm::sparse_vector_serial_layout< SV >, bm::str_sparse_vector< CharType, BV, STR_SIZE >, bm::str_sparse_vector< CharType, BV, STR_SIZE >::back_insert_iterator, bm::str_sparse_vector< CharType, BV, STR_SIZE >::const_iterator, bm::sv_sample_index< SV >, bm::sv_serialization_plan_builder< SV >
- allow_stat_reset() : bm::serializer< BV >
- and_bit_no_check() : bm::bvector< Alloc >
- any() : bm::bvector< Alloc >
- any_carry_overs() : bm::aggregator< BV >
- any_range() : bm::bvector< Alloc >
- ap_ : bm::basic_bmatrix< BV >
- apply_xor_match_vector() : bm::xor_scanner< BV >
- arg_bv0 : bm::aggregator< BV >::arg_groups
- arg_bv1 : bm::aggregator< BV >::arg_groups
- arg_groups_type_ptr : bm::aggregator< BV >
- arg_idx0 : bm::aggregator< BV >::arg_groups
- arg_idx1 : bm::aggregator< BV >::arg_groups
- arg_vect_ : bm::aggregator< BV >::pipeline< Opt >
- arg_vector_type : bm::aggregator< BV >
- argp : bm::task_descr
- assign() : bm::str_sparse_vector< CharType, BV, STR_SIZE >
- at() : bm::compressed_collection< Value, BV >, bm::rsc_sparse_vector< Val, SV >, bm::sparse_vector< Val, BV >
- attach_sv() : bm::set2set_11_transform< SV >